Authors and Citation

Authors

• Timothy Barry. Author, maintainer.

• Joseph Deutsch. Author.

• Eugene Katsevich. Author.

Citation

Barry, T., Wang, X., Morris, J. A., Roeder, K., & Katsevich, E. (2021). SCEPTRE improves calibration and sensitivity in single-cell CRISPR screen analysis. Genome biology, 22(1), 1-19.

@Article{,
  note = {Please cite if you are using the high-MOI functionality.},
  author = {Timothy Barry and Xuran Wang and John A Morris and Kathryn Roeder and Eugene Katsevich},
  title = {SCEPTRE improves calibration and sensitivity in single-cell CRISPR screen analysis},
  journal = {Genome Biology},
  year = {2021},
  publisher = {Springer Nature},
  url = {https://genomebiology.biomedcentral.com/articles/10.1186/s13059-021-02545-2},
}

Barry, T., Roeder, K., & Katsevich, E. (2024). Exponential family measurement error models for single-cell CRISPR screens. Biostatistics, kxae010.

@Article{,
  note = {Please cite if you are using the 'mixture' gRNA assignment method.},
  author = {Timothy Barry and Kathryn Roeder and Eugene Katsevich},
  title = {Exponential family measurement error models for single-cell CRISPR screens},
  journal = {Biostatistics},
  pages = {kxae010},
  year = {2024},
  publisher = {Oxford University Press},
  url = {https://doi.org/10.1093/biostatistics/kxae010},
}

Barry, T., Mason, K., Roeder, K., & Katsevich, E. (2024). Robust differential expression testing for single-cell CRISPR screens at low multiplicity of infection. Genome Biology, 25(124), 1-30.

@Article{,
  note = {Please cite if you are using the low-MOI functionality.},
  title = {Robust differential expression testing for single-cell CRISPR screens at low multiplicity of infection},
  author = {Timothy Barry and Kaishu Mason and Kathryn Roeder and Eugene Katsevich},
  journal = {Genome Biology},
  pages = {1-30},
  year = {2024},
  publisher = {Springer Nature},
  url = {https://genomebiology.biomedcentral.com/articles/10.1186/s13059-024-03254-2},
}